Research
Xue - Structural bioinformatics
Achievements
- DeepRank - a deep learning framework for data mining very large sets of protein-protein structures
- iScore - a novel graph kernel based scoring method for ranking protein-protein docking models
- pdb2sql - a handy python tool for playing with PDB files
- PSSMgen - a handy tool to generate PSSM files and mapping them to PDB files
- Automatic Mutation server HOPE
- Tolerance plots based on homologous domains
- Search Engine for biological and medical databases
- Deep learning tutorials
- Video: example of the work on 3D structures in relation to medicine