Genomics Expertise

The Radboud Technology Center Genomics offers state-of-the-art expertise in the forefront of sequencing technology developments.

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Genomics Expertise

Areas of expertise

  • DNA isolation
  • DNA biobanking
  • High throughput sequencing using targeted strategies (like PCR, hybridization or MIP-based target enrichment both for Sanger and next generation sequencing)
  • Genome wide sequencing strategies using next generation sequencing (non-invasive prenatal testing, exome and genome). 

Center Director

dr. Janneke Weiss
Laboratoriumspecialist klinische genetica

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Scientific Director

Alexander Hoischen

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News

21 September 2022

Lunch and Learn seminar Twist Pacbio

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Genome diagnostics

We perform prenatal as postnatal genetic diagnostics. We offer diagnostics to a large number of hereditary and innate conditions.

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Contact us

GTC@radboudumc.nl
Tel: ++31 (0)24 3617891

Postal address

Attn. Janneke Weiss
Genome Technology Center (Route 848)
Radboud University Medical Center
Geert Grooteplein Zuid 30
6525 GA, Nijmegen
The Netherlands


Instruments and equipment

  • NovaSeq6000 (Illumina)
  • NextSeq500 (Illumina)
  • MiniSeq (Illumina)
  • Sequel (Pacific Biosciences)
  • Sequel IIe (Pacific Biocsciences)
  • Saphyr (Bionano)
  • ABI 3730XL analyzer (ThermoFisher)
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Instruments and equipment

In our lab we have a variety of Instruments and equipment available.

  • 3x - NovaSeq6000 (Illumina)
  • 2x - NextSeq500 (Illumina)
  • 1x - MiniSeq (Illumina)
  • 2x - Sequel  (Pacific Biosciences)
  • 5x - Sequel IIe (Pacific Biosciences)
  • 1x – Saphyr (Bionano)
  • 2x – ABI 3730XL analyzer (ThermoFisher)
     
  • Samplix Xdrop
  • Fragment analyzer
  • Megaruptor
  • Blue Pippin
  • Miroculus Miro Canvas

Services

  • Short read whole genome sequencing
  • Long read whole genome sequencing
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Services

For up to date information about sequencing projects, practical questions or prices, please contact us via GTC@radboudumc.nl

Short Read – WGS 

Long Read - WGS

With the Sequel IIe system (Pacific Biosciences) we are able to generate long sequencing reads for WGS applications. 

Hi-Fi Mode:

For generating sequencing reads with an average length of 15-20kb with a minimum accuracy of 99.9%
     - SNV, InDel and SV Detection
     - De Novo assembly

We can offer the following services:
•    Preparing whole genome libraries from gDNA and sequencing
•    Sequencing only of finished SMRTbell libraries
 

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